{ "_id": "6a215d87cd65a98ecbd2f892", "Package": "surveyPrev", "Type": "Package", "Title": "Mapping the Prevalence of Binary Indicators using Survey Data in\nSmall Areas", "Version": "2.0.0", "Authors@R": "c(\nperson(given = \"Qianyu\", family = \"Dong\", email= \"qdong14@ucsc.edu\", role = c(\"cre\", \"aut\")),\nperson(given = \"Zehang R\", family = \"Li\", email= \"lizehang@gmail.com\", role = \"aut\"),\nperson(given = \"Yunhan\", family = \"Wu\", email= \"yunhanwu@uw.edu\", role = \"aut\"),\nperson(given = \"Jieyi\", family = \"Xu\", email= \"jieyixu@uw.edu\", role = \"aut\"),\nperson(given = \"Andrea\", family = \"Boskovic\", email= \"abosko26@uw.edu\", role = \"aut\"),\nperson(given = \"Jon\", family = \"Wakefield\", email = \"jonno@uw.edu\", role = \"aut\")\n)", "Description": "Provides a pipeline to perform small area estimation and\nprevalence mapping of binary indicators using health and\ndemographic survey data, described in Dong et al. (2026)\n, Wakefield et al. (2025)\n and Wakefield et al. (2020)\n.", "URL": "https://github.com/richardli/surveyPrev", "BugReports": "https://github.com/richardli/surveyPrev/issues", "License": "GPL (>= 2)", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.2", "Additional_repositories": "https://inla.r-inla-download.org/R/testing/", "VignetteBuilder": "R.rsp, knitr", "NeedsCompilation": "no", "Config/build/clean-inst-doc": "FALSE", "Config/pak/sysreqs": "libabsl-dev libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libgdal-dev gdal-bin libgeos-dev make\nlibicu-dev libpng-dev libuv1-dev libxml2-dev libssl-dev\nlibproj-dev libsqlite3-dev libudunits2-dev libx11-dev\nzlib1g-dev", "Repository": "https://richardli.r-universe.dev", "Date/Publication": "2026-06-04 06:08:17 UTC", "RemoteUrl": "https://github.com/richardli/surveyprev", "RemoteRef": "HEAD", "RemoteSha": "751c689379fc0841fa684a06749ae89848a39f53", "Packaged": { "Date": "2026-06-04 11:04:39 UTC", "User": "root" }, "Author": "Qianyu Dong [cre, aut],\nZehang R Li 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[ "SpatialPolygonsDataFrame" ], "fields": [], "table": false, "tojson": false }, { "name": "ZambiaPopWomen", "title": "Population estimates for Women of age 15 to 49 in Zambia in 2018.", "object": "ZambiaPopWomen", "class": [ "list" ], "fields": [], "table": false, "tojson": true } ], "_help": [ { "page": "addNewIndicator", "title": "Create new row to add in indicatorList.", "topics": [ "addNewIndicator" ] }, { "page": "addUpper", "title": "Attach upper-level admin names to lower-level polygons", "topics": [ "addUpper" ] }, { "page": "adminInfo", "title": "Get admin information", "topics": [ "adminInfo" ] }, { "page": "aggPopulation", "title": "Get population information", "topics": [ "aggPopulation" ] }, { "page": "aggSurveyWeight", "title": "Get survey weight by admin levels", "topics": [ "aggSurveyWeight" ] }, { "page": "AH_TOBC_W_OTH", "title": "AH_TOBC_W_OTH", "topics": [ "AH_TOBC_W_OTH" ] }, { "page": "AH_TOBU_M_ASM", "title": "AH_TOBU_M_ASM", "topics": [ "AH_TOBU_M_ASM" ] }, { "page": "AH_TOBU_M_SNN", "title": "AH_TOBU_M_SNN", "topics": [ "AH_TOBU_M_SNN" ] }, { "page": "AH_TOBU_W_SNM", "title": "AH_TOBU_W_SNM", "topics": [ "AH_TOBU_W_SNM" ] }, { "page": "AH_TOBU_W_SNN", "title": "AH_TOBU_W_SNN", "topics": [ "AH_TOBU_W_SNN" ] }, { "page": "AN_ANEM_W_ANY", "title": "AN_ANEM_W_ANY IRdata Percentage of women aged 15-49 classified as having any anemia", "topics": [ "AN_ANEM_W_ANY" ] }, { "page": "AN_NUTS_W_OVW", "title": "AN_NUTS_W_OVW Women who are overweight according to BMI (25.0-29.9) nt_wm_ovwt in github IR", "topics": [ "AN_NUTS_W_OVW" ] }, { "page": "AN_NUTS_W_THN", "title": "AN_NUTS_W_THN IRdata Women who are thin according to BMI (<18.5)", "topics": [ "AN_NUTS_W_THN" ] }, { "page": "ch_allvac_either", "title": "CH_VACS_C_BAS Children with all 8 basic vaccinations (age 12-23) \"All basic vaccinations according to either source\"", "topics": [ "ch_allvac_either" ] }, { "page": "CH_ARIS_C_ADV", "title": "CH_ARIS_C_ADV Children with ARI for whom advice or treatment was sought; ch_ari_care in github KR", "topics": [ "CH_ARIS_C_ADV" ] }, { "page": "ch_diar_ors_rhf", "title": "CH_DIAT_C_ORT KR Diarrhea treatment (Children under five with diarrhea treated with either ORS or RHF)", "topics": [ "ch_diar_ors_rhf" ] }, { "page": "CH_DIAT_C_ABI", "title": "CH_DIAT_C_ABI", "topics": [ "CH_DIAT_C_ABI" ] }, { "page": "CH_DIAT_C_ADV", "title": "CH_DIAT_C_ADV Treatment of diarrhea: Advice or treatment was sought; ch_diar_care in github KR", "topics": [ "CH_DIAT_C_ADV" ] }, { "page": "CH_DIAT_C_AMO", "title": "CH_DIAT_C_AMO", "topics": [ "CH_DIAT_C_AMO" ] }, { "page": "CH_DIAT_C_NOT", "title": "CH_DIAT_C_NOT", "topics": [ "CH_DIAT_C_NOT" ] }, { "page": "CH_DIAT_C_ORS", "title": "CH_DIAT_C_ORS", "topics": [ "CH_DIAT_C_ORS" ] }, { "page": "CH_DIAT_C_ORT", "title": "CH_DIAT_C_ORT", "topics": [ "CH_DIAT_C_ORT" ] }, { "page": "CH_DIAT_C_OSI", "title": "CH_DIAT_C_OSI", "topics": [ "CH_DIAT_C_OSI" ] }, { "page": "CH_DIAT_C_RHF", "title": "CH_DIAT_C_RHF", "topics": [ "CH_DIAT_C_RHF" ] }, { "page": "CH_DIFP_C_FAL", "title": "CH_DIFP_C_FAL", "topics": [ "CH_DIFP_C_FAL" ] }, { "page": "CH_FEVR_C_FEV", "title": "CH_FEVR_C_FEV", "topics": [ "CH_FEVR_C_FEV" ] }, { "page": "CH_FEVT_C_ADV", "title": "CH_FEVT_C_ADV Children with fever for whom advice or treatment was sought ch_fev_care in github ml_fev_care should produce the same data KR", "topics": [ "CH_FEVT_C_ADV" ] }, { "page": "ch_meas_either", "title": "CH_VACC_C_MSL MCV: Measles Measles vaccination received Percentage of children (age 12-23) ch_meas_either CH_VAC.do KR \"Measles vaccination according to either source\"", "topics": [ "ch_meas_either" ] }, { "page": "ch_novac_either", "title": "CH_VACC_C_NON KR Children with no vaccinations (age 12-23)", "topics": [ "ch_novac_either" ] }, { "page": "ch_pent1_either", "title": "CH_VACC_C_DP1 KR Percentage of children (age 12-23) Pentavalent 1rd dose vaccination according to either source\"", "topics": [ "ch_pent1_either" ] }, { "page": "ch_pent3_either", "title": "CH_VACC_C_DP3 DPT3 KR Percentage of children (age 12-23) Pentavalent 3rd dose vaccination according to either source\"", "topics": [ "ch_pent3_either" ] }, { "page": "CH_SZWT_C_L25", "title": "CH_SZWT_C_L25", "topics": [ "CH_SZWT_C_L25" ] }, { "page": "CH_VACC_C_BAS", "title": "CH_VACC_C_BAS KRdata Children with all 8 basic vaccinations (age 12-23)", "topics": [ "CH_VACC_C_BAS" ] }, { "page": "CH_VACC_C_BCG", "title": "CH_VACC_C_BCG Percentage of children 12-23 months who had received BCG vaccination ms_afm_15 in github KR", "topics": [ "CH_VACC_C_BCG" ] }, { "page": "CH_VACC_C_DP1", "title": "CH_VACC_C_DP1 KRdata Pentavalent 1st dose vaccination Percentage of children (age 12-23) with 1st dose of Pentavalent vaccine", "topics": [ "CH_VACC_C_DP1" ] }, { "page": "CH_VACC_C_DP3", "title": "CH_VACC_C_DP3 KRdata Pentavalent 3rd dose vaccination Percentage of children (age 12-23) with 3rd dose of Pentavalent vaccine", "topics": [ "CH_VACC_C_DP3" ] }, { "page": "CH_VACC_C_MSL", "title": "CH_VACC_C_MSL KRdata Measles vaccination received Percentage of children (age 12-23)", "topics": [ "CH_VACC_C_MSL" ] }, { "page": "CH_VACC_C_NON", "title": "CH_VACC_C_NON KRdata Children with no vaccinations (age 12-23)", "topics": [ "CH_VACC_C_NON" ] }, { "page": "CH_VACC_C_PN3", "title": "CH_VACC_C_PN3 KRdata Pneumococcal 3rd dose vaccination Percentage of children (age 12-23)", "topics": [ "CH_VACC_C_PN3" ] }, { "page": "clusterInfo", "title": "Get cluster information", "topics": [ "clusterInfo" ] }, { "page": "clusterModel", "title": "Calculate cluster model estimates using beta binomial model", "topics": [ "clusterModel" ] }, { "page": "clusterModel_u5mr", "title": "Calculate cluster model estimates using beta binomial model for U5MR", "topics": [ "clusterModel_u5mr" ] }, { "page": "CM_ECMR_C_IMF", "title": "CM_ECMR_C_IMF imr 5 years prior to survey.", "topics": [ "CM_ECMR_C_IMF" ] }, { "page": "CM_ECMR_C_IMR", "title": "CM_ECMR_C_IMR imr 10 years prior to survey.", "topics": [ "CM_ECMR_C_IMR" ] }, { "page": "CM_ECMR_C_NNF", "title": "CM_ECMR_C_NNF NMR five years prior to survey.", "topics": [ "CM_ECMR_C_NNF" ] }, { "page": "CM_ECMR_C_NNR", "title": "CM_ECMR_C_NNR BRdata Neonatal mortality rate", "topics": [ "CM_ECMR_C_NNR" ] }, { "page": "CM_ECMR_C_U5F", "title": "CM_ECMR_C_U5F u5mr 5 years prior to survey.", "topics": [ "CM_ECMR_C_U5F" ] }, { "page": "CM_ECMR_C_U5M", "title": "CM_ECMR_C_U5M u5mr 10 years prior to survey.", "topics": [ "CM_ECMR_C_U5M" ] }, { "page": "CN_ANMC_C_ANY", "title": "CN_ANMC_C_ANY PRdata Children with any anemia Children under five with any anemia", "topics": [ "CN_ANMC_C_ANY" ] }, { "page": "CN_BRFI_C_EVR", "title": "CN_BRFI_C_EVR", "topics": [ "CN_BRFI_C_EVR" ] }, { "page": "CN_BRFS_C_EXB", "title": "CN_BRFS_C_EXB KRdata Children exclusively breastfed Prevalence of exclusive breastfeeding of children under six months of age", "topics": [ "CN_BRFS_C_EXB" ] }, { "page": "CN_IYCF_C_4FA", "title": "CN_IYCF_C_4FA Percentage of children age 6-23 months fed five or more food groups. The food groups are a. breastmilk b. infant formula, milk other than breast milk, cheese or yogurt or other milk products; c. foods made from grains, roots, and tubers, including porridge and fortified baby food from grains; d. vitamin A-rich fruits and vegetables (and red palm oil); e. other fruits and vegetables; f. eggs; g. meat, poultry, fish, and shellfish (and organ meats); h. legumes and nuts. nt_mdd in github KR", "topics": [ "CN_IYCF_C_4FA" ] }, { "page": "CN_NUTS_C_HA2", "title": "CN_NUTS_C_HA2", "topics": [ "CN_NUTS_C_HA2" ] }, { "page": "CN_NUTS_C_HA3", "title": "CN_NUTS_C_HA3", "topics": [ "CN_NUTS_C_HA3" ] }, { "page": "CN_NUTS_C_WA2", "title": "CN_NUTS_C_WA2", "topics": [ "CN_NUTS_C_WA2" ] }, { "page": "CN_NUTS_C_WA3", "title": "CN_NUTS_C_WA3", "topics": [ "CN_NUTS_C_WA3" ] }, { "page": "CN_NUTS_C_WAP", "title": "CN_NUTS_C_WAP", "topics": [ "CN_NUTS_C_WAP" ] }, { "page": "CN_NUTS_C_WH2", "title": "CN_NUTS_C_WH2", "topics": [ "CN_NUTS_C_WH2" ] }, { "page": "CN_NUTS_C_WH3", "title": "CN_NUTS_C_WH3", "topics": [ "CN_NUTS_C_WH3" ] }, { "page": "CN_NUTS_C_WHP", "title": "CN_NUTS_C_WHP", "topics": [ "CN_NUTS_C_WHP" ] }, { "page": "CO_INUS_W_EVU", "title": "CO_INUS_W_EVU", "topics": [ "CO_INUS_W_EVU" ] }, { "page": "CO_INUS_W_U12", "title": "CO_INUS_W_U12", "topics": [ "CO_INUS_W_U12" ] }, { "page": "CO_MOBB_W_BNK", "title": "CO_MOBB_W_BNK", "topics": [ "CO_MOBB_W_BNK" ] }, { "page": "CO_MOBB_W_MBF", "title": "CO_MOBB_W_MBF", "topics": [ "CO_MOBB_W_MBF" ] }, { "page": "CO_MOBB_W_MOB", "title": "CO_MOBB_W_MOB", "topics": [ "CO_MOBB_W_MOB" ] }, { "page": "CP_BREG_C_CRT", "title": "CP_BREG_C_CRT", "topics": [ "CP_BREG_C_CRT" ] }, { "page": "CP_BREG_C_NCT", "title": "CP_BREG_C_NCT", "topics": [ "CP_BREG_C_NCT" ] }, { "page": "CP_BREG_C_REG", "title": "CP_BREG_C_REG", "topics": [ "CP_BREG_C_REG" ] }, { "page": "datainfo", "title": "Summarize Sample and Event Information by Administrative Level", "topics": [ "datainfo" ] }, { "page": "directEST", "title": "Calculate direct estimates", "topics": [ "directEST" ] }, { "page": "directEST_u5mr", "title": "Helper function for the U5MR direct estimation", "topics": [ "directEST_u5mr" ] }, { "page": "directEST_varfix", "title": "Calculate direct estimates", "topics": [ "directEST_varfix" ] }, { "page": "DV_AFSV_W_A10", "title": "DV_AFSV_W_A10", "topics": [ "DV_AFSV_W_A10" ] }, { "page": "DV_AFSV_W_A12", "title": "DV_AFSV_W_A12", "topics": [ "DV_AFSV_W_A12" ] }, { "page": "DV_EXPV_W_12M", "title": "DV_EXPV_W_12M Percentage of women who have experienced physical violence in the past 12 months often or sometimes dv_phy_12m in github IR", "topics": [ "DV_EXPV_W_12M" ] }, { "page": "DV_EXSV_W_12M", "title": "DV_EXSV_W_12M Percentage of women who ever experienced sexual violence dv_sex_12m in github IR", "topics": [ "DV_EXSV_W_12M" ] }, { "page": "DV_EXSV_W_EVR", "title": "DV_EXSV_W_EVR Percentage of women who ever experienced sexual violence dv_sex in github IR", "topics": [ "DV_EXSV_W_EVR" ] }, { "page": "DV_PCPV_W_CBF", "title": "DV_PCPV_W_CBF", "topics": [ "DV_PCPV_W_CBF" ] }, { "page": "DV_PCPV_W_CHD", "title": "DV_PCPV_W_CHD", "topics": [ "DV_PCPV_W_CHD" ] }, { "page": "DV_PCPV_W_EMP", "title": "DV_PCPV_W_EMP", "topics": [ "DV_PCPV_W_EMP" ] }, { "page": "DV_PCPV_W_FLW", "title": "DV_PCPV_W_FLW", "topics": [ "DV_PCPV_W_FLW" ] }, { "page": "DV_PCPV_W_OLW", "title": "DV_PCPV_W_OLW", "topics": [ "DV_PCPV_W_OLW" ] }, { "page": "DV_STPS_W_BFR", "title": "DV_STPS_W_BFR", "topics": [ "DV_STPS_W_BFR" ] }, { "page": "DV_VPRG_W_VPG", "title": "DV_VPRG_W_VPG", "topics": [ "DV_VPRG_W_VPG" ] }, { "page": "ED_EDUC_W_SEH", "title": "ED_EDUC_W_SEH IRdata Percentage of women with secondary or higher education", "topics": [ "ED_EDUC_W_SEH" ] }, { "page": "ED_LITR_W_LIT", "title": "ED_LITR_W_LIT", "topics": [ "ED_LITR_W_LIT" ] }, { "page": "ED_MDIA_W_3MD", "title": "ED_MDIA_W_3MD", "topics": [ "ED_MDIA_W_3MD" ] }, { "page": "ED_MDIA_W_N3M", "title": "ED_MDIA_W_N3M", "topics": [ "ED_MDIA_W_N3M" ] }, { "page": "ED_MDIA_W_NWS", "title": "ED_MDIA_W_NWS", "topics": [ "ED_MDIA_W_NWS" ] }, { "page": "ED_MDIA_W_RDO", "title": "ED_MDIA_W_RDO", "topics": [ "ED_MDIA_W_RDO" ] }, { "page": "ED_MDIA_W_TLV", "title": "ED_MDIA_W_TLV", "topics": [ "ED_MDIA_W_TLV" ] }, { "page": "EM_EMPM_W_EMP", "title": "EM_EMPM_W_EMP", "topics": [ "EM_EMPM_W_EMP" ] }, { "page": "exceedPlot", "title": "Plot exceedance probability of model results", "topics": [ "exceedPlot" ] }, { "page": "FG_KFCC_W_HFC", "title": "FG_KFCC_W_HFC IRdata Percentage of women who have ever heard of female circumcision", "topics": [ "FG_KFCC_W_HFC" ] }, { "page": "FG_PFCC_W_WCC", "title": "FG_PFCC_W_WCC IRdata Percentage of women circumcised (women who experienced female genital cutting (FGM))", "topics": [ "FG_PFCC_W_WCC" ] }, { "page": "fhModel", "title": "Calculate smoothed direct estimates", "topics": [ "fhModel" ] }, { "page": "fp_cruse_mod", "title": "FP_CUSA_W_MOD IRdata Modern contraceptive prevalence rate (women currently using any modern method of contraception)", "topics": [ "fp_cruse_mod" ] }, { "page": "FP_CUSA_W_ANY", "title": "FP_CUSA_W_ANY", "topics": [ "FP_CUSA_W_ANY" ] }, { "page": "FP_CUSA_W_EMC", "title": "FP_CUSA_W_EMC", "topics": [ "FP_CUSA_W_EMC" ] }, { "page": "FP_CUSA_W_FCN", "title": "FP_CUSA_W_FCN", "topics": [ "FP_CUSA_W_FCN" ] }, { "page": "FP_CUSA_W_FST", "title": "FP_CUSA_W_FST", "topics": [ "FP_CUSA_W_FST" ] }, { "page": "FP_CUSA_W_IMP", "title": "FP_CUSA_W_IMP", "topics": [ "FP_CUSA_W_IMP" ] }, { "page": "FP_CUSA_W_INJ", "title": "FP_CUSA_W_INJ", "topics": [ "FP_CUSA_W_INJ" ] }, { "page": "FP_CUSA_W_IUD", "title": "FP_CUSA_W_IUD", "topics": [ "FP_CUSA_W_IUD" ] }, { "page": "FP_CUSA_W_MCN", "title": "FP_CUSA_W_MCN", "topics": [ "FP_CUSA_W_MCN" ] }, { "page": "FP_CUSA_W_MOD", "title": "FP_CUSA_W_MOD IRdata Modern contraceptive prevalence rate (women currently using any modern method of contraception)", "topics": [ "FP_CUSA_W_MOD" ] }, { "page": "FP_CUSA_W_MST", "title": "FP_CUSA_W_MST", "topics": [ "FP_CUSA_W_MST" ] }, { "page": "FP_CUSA_W_PIL", "title": "FP_CUSA_W_PIL", "topics": [ "FP_CUSA_W_PIL" ] }, { "page": "FP_CUSA_W_STD", "title": "FP_CUSA_W_STD", "topics": [ "FP_CUSA_W_STD" ] }, { "page": "FP_CUSA_W_TRA", "title": "FP_CUSA_W_TRA", "topics": [ "FP_CUSA_W_TRA" ] }, { "page": "FP_CUSA_W_WTH", "title": "FP_CUSA_W_WTH", "topics": [ "FP_CUSA_W_WTH" ] }, { "page": "FP_CUSM_W_MOD", "title": "FP_CUSM_W_MOD IRdata Modern contraceptive prevalence rate (Married women currently using any modern method of contraception)", "topics": [ "FP_CUSM_W_MOD" ] }, { "page": "FP_EFPM_M_NWS", "title": "FP_EFPM_M_NWS", "topics": [ "FP_EFPM_M_NWS" ] }, { "page": "FP_EFPM_M_TLV", "title": "FP_EFPM_M_TLV", "topics": [ "FP_EFPM_M_TLV" ] }, { "page": "FP_EFPM_W_NWS", "title": "FP_EFPM_W_NWS", "topics": [ "FP_EFPM_W_NWS" ] }, { "page": "FP_EFPM_W_RDO", "title": "FP_EFPM_W_RDO", "topics": [ "FP_EFPM_W_RDO" ] }, { "page": "FP_EFPM_W_TLV", "title": "FP_EFPM_W_TLV", "topics": [ "FP_EFPM_W_TLV" ] }, { "page": "FP_EVUM_W_MOD", "title": "FP_EVUM_W_MOD", "topics": [ "FP_EVUM_W_MOD" ] }, { "page": "FP_KMTA_W_ANY", "title": "FP_KMTA_W_ANY", "topics": [ "FP_KMTA_W_ANY" ] }, { "page": "FP_KMTA_W_EMC", "title": "FP_KMTA_W_EMC", "topics": [ "FP_KMTA_W_EMC" ] }, { "page": "FP_KMTA_W_FCN", "title": "FP_KMTA_W_FCN", "topics": [ "FP_KMTA_W_FCN" ] }, { "page": "FP_KMTA_W_FST", "title": "FP_KMTA_W_FST", "topics": [ "FP_KMTA_W_FST" ] }, { "page": "FP_KMTA_W_IMP", "title": "FP_KMTA_W_IMP", "topics": [ "FP_KMTA_W_IMP" ] }, { "page": "FP_KMTA_W_INJ", "title": "FP_KMTA_W_INJ", "topics": [ "FP_KMTA_W_INJ" ] }, { "page": "FP_KMTA_W_IUD", "title": "FP_KMTA_W_IUD", "topics": [ "FP_KMTA_W_IUD" ] }, { "page": "FP_KMTA_W_MST", "title": "FP_KMTA_W_MST", "topics": [ "FP_KMTA_W_MST" ] }, { "page": "FP_KMTA_W_OMD", "title": "FP_KMTA_W_OMD", "topics": [ "FP_KMTA_W_OMD" ] }, { "page": "FP_KMTA_W_PIL", "title": "FP_KMTA_W_PIL", "topics": [ "FP_KMTA_W_PIL" ] }, { "page": "FP_KMTA_W_STD", "title": "FP_KMTA_W_STD", "topics": [ "FP_KMTA_W_STD" ] }, { "page": "FP_KMTA_W_TRA", "title": "FP_KMTA_W_TRA", "topics": [ "FP_KMTA_W_TRA" ] }, { "page": "FP_KMTA_W_WTH", "title": "FP_KMTA_W_WTH", "topics": [ "FP_KMTA_W_WTH" ] }, { "page": "FP_NADA_W_UNT", "title": "FP_NADA_W_UNT IRdata Women with an unmet need for family planning for spacing and limiting", "topics": [ "FP_NADA_W_UNT" ] }, { "page": "FP_NADM_W_PDM", "title": "FP_NADA_W_UNT IRdata Women with an unmet need for family planning for spacing and limiting", "topics": [ "FP_NADM_W_PDM" ] }, { "page": "FP_NADM_W_UNT", "title": "FP_NADM_W_UNT #unmet_family IRdata Married women with an unmet need for family planning for spacing and limiting, line 17 manually added by Qianyu", "topics": [ "FP_NADM_W_UNT" ] }, { "page": "FP_NDYA_W_PDM", "title": "FP_NADA_W_UNT IRdata Women with an unmet need for family planning for spacing and limiting", "topics": [ "FP_NDYA_W_PDM" ] }, { "page": "fp_unmet_tot", "title": "FP_NADA_W_UNT #unmet_family IRdata women with an unmet need for family planning for spacing and limiting", "topics": [ "fp_unmet_tot" ] }, { "page": "get_api_table", "title": "Function to obtain subnational estimates from DHS API", "topics": [ "get_api_table" ] }, { "page": "get_geoBoundaries", "title": "Download geoBoundaries Shapefile as sf Object", "topics": [ "get_geoBoundaries" ] }, { "page": "getCovariate", "title": "Extract Covariate Data from A list of Rasters", "topics": [ "getCovariate" ] }, { "page": "getDHSdata", "title": "Download DHS survey data", "topics": [ "getDHSdata" ] }, { "page": "getDHSgeo", "title": "Download DHS geo data", "topics": [ "getDHSgeo" ] }, { "page": "getDHSindicator", "title": "Process DHS data", "topics": [ "getDHSindicator" ] }, { "page": "getUR", "title": "Function to threshold population raster to obtain urban/rural fractions by Admin1 and Admin2 areas", "topics": [ "getUR" ] }, { "page": "HA_AFSY_M_A15", "title": "HA_AFSY_M_A15", "topics": [ "HA_AFSY_M_A15" ] }, { "page": "HA_AFSY_M_A18", "title": "HA_AFSY_M_A18", "topics": [ "HA_AFSY_M_A18" ] }, { "page": "HA_AFSY_W_A18", "title": "HA_AFSY_W_A18", "topics": [ "HA_AFSY_W_A18" ] }, { "page": "HA_ANSS_M_CND", "title": "HA_ANSS_M_CND", "topics": [ "HA_ANSS_M_CND" ] }, { "page": "HA_ANSS_W_CND", "title": "HA_ANSS_W_CND", "topics": [ "HA_ANSS_W_CND" ] }, { "page": "HA_ANSS_W_RSX", "title": "HA_ANSS_W_RSX", "topics": [ "HA_ANSS_W_RSX" ] }, { "page": "HA_CATH_W_ATN", "title": "HA_CATH_W_ATN", "topics": [ "HA_CATH_W_ATN" ] }, { "page": "HA_CATH_W_NRS", "title": "HA_CATH_W_NRS", "topics": [ "HA_CATH_W_NRS" ] }, { "page": "HA_HRSX_W_CND", "title": "HA_HRSX_W_CND", "topics": [ "HA_HRSX_W_CND" ] }, { "page": "HA_HVST_M_HRD", "title": "HA_HVST_M_HRD", "topics": [ "HA_HVST_M_HRD" ] }, { "page": "HA_HVST_M_USD", "title": "HA_HVST_M_USD", "topics": [ "HA_HVST_M_USD" ] }, { "page": "HA_HVTY_M_TRR", "title": "HA_HVTY_M_TRR", "topics": [ "HA_HVTY_M_TRR" ] }, { "page": "HA_HVTY_W_TRR", "title": "HA_HVTY_W_TRR", "topics": [ "HA_HVTY_W_TRR" ] }, { "page": "HA_KAID_W_HRD", "title": "HA_KAID_W_HRD Percentage of women who have heard of HIV or AIDS hk_ever_heard in github IR", "topics": [ "HA_KAID_W_HRD" ] }, { "page": "HA_STIS_M_DIS", "title": "HA_STIS_M_DIS", "topics": [ "HA_STIS_M_DIS" ] }, { "page": "HA_STIS_M_SOR", "title": "HA_STIS_M_SOR", "topics": [ "HA_STIS_M_SOR" ] }, { "page": "HA_STIS_W_STI", "title": "HA_STIS_W_STI Percentage of women reporting a sexually transmitted infection in the 12 months preceding the survey among women who ever had sexual intercourse hk_sti in github IR", "topics": [ "HA_STIS_W_STI" ] }, { "page": "HC_AGEG_P_ADL", "title": "HC_AGEG_P_ADL", "topics": [ "HC_AGEG_P_ADL" ] }, { "page": "HC_ELEC_H_ELC", "title": "HC_ELEC_H_ELC Percentage of households with electricity ph_electric in github HR", "topics": [ "HC_ELEC_H_ELC" ] }, { "page": "HC_FLRM_H_CER", "title": "HC_FLRM_H_CER Percentage of households with ceramic tile floors ph_floor in github HR", "topics": [ "HC_FLRM_H_CER" ] }, { "page": "HC_HEFF_H_RDO", "title": "HC_HEFF_H_RDO Percentage of households possessing a radio ph_radio in github HR", "topics": [ "HC_HEFF_H_RDO" ] }, { "page": "HC_WIXQ_P_12Q", "title": "HC_WIXQ_P_12Q PRdata Population in the lowest and second wealth quintile", "topics": [ "HC_WIXQ_P_12Q" ] }, { "page": "HC_WIXQ_P_2ND", "title": "HC_WIXQ_P_2ND PRdata Population in the second wealth quintile", "topics": [ "HC_WIXQ_P_2ND" ] }, { "page": "HC_WIXQ_P_LOW", "title": "HC_WIXQ_P_LOW PRdata Population in the lowest wealth quintile", "topics": [ "HC_WIXQ_P_LOW" ] }, { "page": "hv_hiv_pos", "title": "HA_HIVP_W_HIV hv_hiv_pos \"HIV positive test result\"", "topics": [ "hv_hiv_pos" ] }, { "page": "indicatorList", "title": "Table of supported DHS indicators.", "topics": [ "indicatorList" ] }, { "page": "intervalPlot", "title": "Get scatter plot for any two model results", "topics": [ "intervalPlot" ] }, { "page": "MA_CWIV_W_CWV", "title": "MA_CWIV_W_CWV", "topics": [ "MA_CWIV_W_CWV" ] }, { "page": "MA_MBAG_W_B15", "title": "MA_MBAG_W_B15 Women first married by exact age 15 ms_afm_15 in github IR", "topics": [ "MA_MBAG_W_B15" ] }, { "page": "MA_MBAG_W_B18", "title": "##' MA_MBAG_W_B18 Percentage of women first married by exact age 18 ms_afm_18 in github IR", "topics": [ "MA_MBAG_W_B18" ] }, { "page": "MA_MBAY_W_B15", "title": "MA_MBAY_W_B15 Young women age 20-24 first married by exact age 15 ms_afm_15 in github IR", "topics": [ "MA_MBAY_W_B15" ] }, { "page": "MA_MBAY_W_B18", "title": "MA_MBAY_W_B18 Percentage of Young women age 20-24 first married by exact age 18 ms_afm_18 in github IR", "topics": [ "MA_MBAY_W_B18" ] }, { "page": "MA_MSTA_W_NMA", "title": "MA_MSTA_W_NMA", "topics": [ "MA_MSTA_W_NMA" ] }, { "page": "match_all_result", "title": "Indicator matching table.", "topics": [ "match_all_result" ] }, { "page": "ml_hhaccess", "title": "ML_ITNA_P_ACC Households with at least one insecticide-treated mosquito net (ITN) for every two persons who stayed in the household the previous night Persons with access to an insecticide-treated mosquito net (ITN) ML_NETS_HH.do HR Households with >1 ITN per 2 household members Percentage of households with at least one ITN for every 2 persons who stayed in the household last night", "topics": [ "ml_hhaccess" ] }, { "page": "ML_NETC_C_ITN", "title": "ML_NETC_C_ITN PRdata Percentage of children under age five who slept under an insecticide treated net (ITN) the night before the survey", "topics": [ "ML_NETC_C_ITN" ] }, { "page": "ML_NETP_H_IT2", "title": "ML_NETP_H_IT2 HRdata Households with access to an insecticide-treated mosquito net (ITN)", "topics": [ "ML_NETP_H_IT2" ] }, { "page": "ML_NETU_P_ITN", "title": "ML_NETU_P_ITN PRdata Percentage of the de facto household population who slept under an insecticide treated net the night before the survey", "topics": [ "ML_NETU_P_ITN" ] }, { "page": "NMR", "title": "CM_ECMR_C_NNR nmr CM_ECMR_C_NNR BR (not from dhs github) Neonatal mortality rate !!!!!!", "topics": [ "NMR" ] }, { "page": "nt_ch_any_anem", "title": "CN_ANMC_C_ANY Children with any anemia \"Any anemia - child 6-59 months\" PR NT_CH_NUT.do Children under five with any anemia", "topics": [ "nt_ch_any_anem" ] }, { "page": "nt_ch_stunt", "title": "CN_NUTS_C_HA2 stunting Children stunted NT_CH_NUT.do PR \"Stunted child under 5 years\" Stunting rate (Prevalence of stunted (HAZ < -2) children under five (0-59 months)) Percentage of children under age five stunted (below -2 standard deviations of height-for-age according to the WHO standard).", "topics": [ "nt_ch_stunt" ] }, { "page": "nt_ch_wast", "title": "CN_NUTS_C_WH2 wasting Children wasted NT_CH_NUT.do PR \"Wasted child under 5 years\" Wasting rate (Prevalence of wasted (HAZ < -2) children under five (0-59 months)) Percentage of children under age five with a weight-for-height z-score (WHZ) more than two standard deviations below the median WHO growth standards.", "topics": [ "nt_ch_wast" ] }, { "page": "nt_ebf", "title": "CN_BRFS_C_EXB Children exclusively breastfed NT_IYCF.do KR \"Exclusively breastfed - last-born under 6 months\" Children exclusively breastfed (Prevalence of exclusive breastfeeding of children under six months of age)", "topics": [ "nt_ebf" ] }, { "page": "nt_wm_any_anem", "title": "AN_ANEM_W_ANY womananemia nt_wm_any_anem \"Any anemia - women\" NT_WM_NUT.do Percentage of women aged 15-49 classified as having any anemia", "topics": [ "nt_wm_any_anem" ] }, { "page": "nt_wm_thin", "title": "AN_NUTS_W_THN Women who are thin according to BMI (<18.5) NT_WM_NUT.do \"Thin BMI - women\" IR !!!!!!!! Underweight (Prevalence of underweight (BMI < 18.5) women of reproductive age)", "topics": [ "nt_wm_thin" ] }, { "page": "ph_sani_basic", "title": "WS_TLET_P_BAS Population with access to a basic sanitation service WS_TLET_P_BAS in DHS API PH_SANI.do PR ph_sani_basic \"Basic sanitation facility\"", "topics": [ "ph_sani_basic" ] }, { "page": "ph_sani_improve", "title": "WS_TLET_H_IMP Percentage of households using an improved sanitation facility PH_SANI.do PR ph_sani_improve \"Access to improved sanitation\" country-specific", "topics": [ "ph_sani_improve" ] }, { "page": "PR_DESL_W_WNM", "title": "PR_DESL_W_WNM", "topics": [ "PR_DESL_W_WNM" ] }, { "page": "prevMap", "title": "static prevalence map for any subnational level", "topics": [ "prevMap" ] }, { "page": "prevMap.web", "title": "leaflet (interactive) prevalence map for any subnational level", "topics": [ "prevMap.web" ] }, { "page": "rankPlot", "title": "Get ranking plot of model results", "topics": [ "rankPlot" ] }, { "page": "rh_anc_4vs", "title": "RH_ANCN_W_N4P ancvisit4+ RH_ANCN_W_N4P IR Antenatal visits for pregnancy: 4+ visits", "topics": [ "rh_anc_4vs" ] }, { "page": "RH_ANCN_W_N01", "title": "AH_TOBC_W_OTH", "topics": [ "RH_ANCN_W_N01" ] }, { "page": "RH_ANCN_W_N4F", "title": "RH_ANCN_W_N4F IRdata Antenatal visits for pregnancy: 4+ visits FIVE year", "topics": [ "RH_ANCN_W_N4F" ] }, { "page": "RH_ANCN_W_N4P", "title": "RH_ANCN_W_N4P IRdata Antenatal visits for pregnancy: 4+ visits TWO year", "topics": [ "RH_ANCN_W_N4P" ] }, { "page": "RH_ANCN_W_NON", "title": "RH_ANCN_W_N4P IRdata Antenatal visits for pregnancy: no visits TWO year", "topics": [ "RH_ANCN_W_NON" ] }, { "page": "rh_del_pvskill", "title": "RH_DELA_C_SKP IR or BR Assistance during delivery from a skilled provider", "topics": [ "rh_del_pvskill" ] }, { "page": "RH_DELA_C_SKF", "title": "RH_DELA_C_SKF BRdata Assistance during delivery from a skilled provider", "topics": [ "RH_DELA_C_SKF" ] }, { "page": "RH_DELA_C_SKP", "title": "RH_DELA_C_SKP BRdata Assistance during delivery from a skilled provider", "topics": [ "RH_DELA_C_SKP" ] }, { "page": "RH_DELP_C_DHF", "title": "RH_DELP_C_DHF", "topics": [ "RH_DELP_C_DHF" ] }, { "page": "RH_DELP_C_DHT", "title": "RH_DELP_C_DHT", "topics": [ "RH_DELP_C_DHT" ] }, { "page": "RH_DELP_C_HOM", "title": "RH_DELP_C_HOM", "topics": [ "RH_DELP_C_HOM" ] }, { "page": "RH_DELP_C_HOT", "title": "RH_DELP_C_HOT", "topics": [ "RH_DELP_C_HOT" ] }, { "page": "RH_DELP_C_PRT", "title": "RH_DELP_C_PRT", "topics": [ "RH_DELP_C_PRT" ] }, { "page": "RH_DELP_C_PRV", "title": "RH_DELP_C_PRV", "topics": [ "RH_DELP_C_PRV" ] }, { "page": "RH_DELP_C_PUB", "title": "RH_DELP_C_PUB", "topics": [ "RH_DELP_C_PUB" ] }, { "page": "RH_DELP_C_PUT", "title": "RH_DELP_C_PUT", "topics": [ "RH_DELP_C_PUT" ] }, { "page": "RH_PAHC_W_DIS", "title": "RH_PAHC_W_DIS IRdata Problems in accessing health care: Distance to health facility", "topics": [ "RH_PAHC_W_DIS" ] }, { "page": "RH_PAHC_W_MON", "title": "RH_PAHC_W_MON IRdata Problems in accessing health care: Getting money for treatment", "topics": [ "RH_PAHC_W_MON" ] }, { "page": "RH_PAHC_W_PRM", "title": "RH_PAHC_W_PRM IRdata Problems in accessing health care: Getting permission to go for treatment", "topics": [ "RH_PAHC_W_PRM" ] }, { "page": "RH_PCCT_C_DY2", "title": "RH_PCCT_C_DY2 Newborn's first postnatal checkup: 1-2 days RH_PCCT_C_DY2 in github IR", "topics": [ "RH_PCCT_C_DY2" ] }, { "page": "RH_PCMT_W_DY2", "title": "RH_PCMT_W_DY2 Mother's first postnatal checkup: 1-2 days IR", "topics": [ "RH_PCMT_W_DY2" ] }, { "page": "RH_PCMT_W_NON", "title": "RH_PCMT_W_NON No Mother's postnatal checkup in 42 days IR", "topics": [ "RH_PCMT_W_NON" ] }, { "page": "ridgeprevPlot", "title": "ridge plot for prevalence", "topics": [ "ridgeprevPlot" ] }, { "page": "scatterPlot", "title": "Get scatter plot for any two model results", "topics": [ "scatterPlot" ] }, { "page": "scatterPlot.web", "title": "web-based scatter plot", "topics": [ "scatterPlot.web" ] }, { "page": "surveyPrevIndicators", "title": "Table of built-in indicators.", "topics": [ "surveyPrevIndicators" ] }, { "page": "watersource_adj", "title": "WS_SRCE_P_BAS Population using a basic water source PH_WATER.do ph_wtr_basic \"Basic water service\" PR", "topics": [ "watersource_adj" ] }, { "page": "WE_AWBT_M_ARG", "title": "WE_AWBT_M_ARG", "topics": [ "WE_AWBT_M_ARG" ] }, { "page": "WE_AWBT_M_BFD", "title": "WE_AWBT_M_BFD", "topics": [ "WE_AWBT_M_BFD" ] }, { "page": "WE_AWBT_M_OUT", "title": "WE_AWBT_M_OUT", "topics": [ "WE_AWBT_M_OUT" ] }, { "page": "WE_AWBT_M_REF", "title": "WE_AWBT_M_REF", "topics": [ "WE_AWBT_M_REF" ] }, { "page": "WE_AWBT_W_ARG", "title": "WE_AWBT_W_ARG", "topics": [ "WE_AWBT_W_ARG" ] }, { "page": "WE_AWBT_W_BFD", "title": "WE_AWBT_W_BFD", "topics": [ "WE_AWBT_W_BFD" ] }, { "page": "WE_AWBT_W_NEG", "title": "WE_AWBT_W_NEG", "topics": [ "WE_AWBT_W_NEG" ] }, { "page": "WE_AWBT_W_OUT", "title": "WE_AWBT_W_OUT", "topics": [ "WE_AWBT_W_OUT" ] }, { "page": "WE_AWBT_W_REF", "title": "WE_AWBT_W_REF", "topics": [ "WE_AWBT_W_REF" ] }, { "page": "WS_SRCE_H_USG", "title": "WS_SRCE_H_USG Percentage of households whose main source of drinking water is an unprotected spring ph_wtr_source in github \"unprotected spring\" = 42, HR", "topics": [ "WS_SRCE_H_USG" ] }, { "page": "WS_SRCE_P_BAS", "title": "WS_SRCE_P_BAS PRdata Population using a basic water source", "topics": [ "WS_SRCE_P_BAS" ] }, { "page": "WS_TLET_H_IMP", "title": "WS_TLET_H_IMP PRdata Percentage of households using an improved sanitation facility", "topics": [ "WS_TLET_H_IMP" ] }, { "page": "WS_TLET_P_BAS", "title": "WS_TLET_P_BAS PRdata Population with access to a basic sanitation service", "topics": [ "WS_TLET_P_BAS" ] }, { "page": "WS_WTRT_P_BLC", "title": "WS_WTRT_P_BLC", "topics": [ "WS_WTRT_P_BLC" ] }, { "page": "WS_WTRT_P_BOL", "title": "WS_WTRT_P_BOL", "topics": [ "WS_WTRT_P_BOL" ] }, { "page": "WS_WTRT_P_SOL", "title": "WS_WTRT_P_SOL", "topics": [ "WS_WTRT_P_SOL" ] }, { "page": "WS_WTRT_P_STN", "title": "WS_WTRT_P_STN", "topics": [ "WS_WTRT_P_STN" ] }, { "page": "ZambiaAdm1", "title": "Admin 1 Polygon Map for Zambia.", "topics": [ "ZambiaAdm1" ] }, { "page": "ZambiaAdm2", "title": "Admin 2 Polygon Map for Zambia.", "topics": [ "ZambiaAdm2" ] }, { "page": "ZambiaPopWomen", "title": "Population estimates for Women of age 15 to 49 in Zambia in 2018.", "topics": [ "ZambiaPopWomen" ] } ], "_readme": "https://github.com/richardli/surveyprev/raw/HEAD/README.md", "_rundeps": [ "askpass", "backports", "base64enc", "bit", "bit64", "boot", "brio", "bslib", "cachem", "checkmate", "class", "classInt", "cli", "clipr", "cpp11", "crayon", "curl", "data.table", "datawizard", "DBI", "deldir", "digest", "dotCall64", "dplyr", "e1071", "evaluate", "expss", "farver", "fastmap", "fields", "fontawesome", "fontBitstreamVera", "fontLiberation", "fontquiver", "forcats", "foreign", "fs", "gdtools", "generics", "getPass", "ggiraph", "ggplot2", "ggridges", "glue", "gridExtra", "gtable", "haven", "highr", "hms", "htmlTable", "htmltools", "htmlwidgets", "httr", "insight", "iotools", "isoband", "jquerylib", "jsonlite", "KernSmooth", "knitr", "labeling", "labelled", "lattice", "lifecycle", "maditr", "magrittr", "maps", "MASS", "Matrix", "matrixStats", "memoise", "mime", "minqa", "mitools", "naniar", "norm", "numDeriv", "openssl", "pillar", "pkgconfig", "plyr", "prettyunits", "progress", "proxy", "purrr", "qdapRegex", "R6", "rappdirs", "raster", "RColorBrewer", "Rcpp", "RcppArmadillo", "rdhs", "readr", "reshape2", "rlang", "rmarkdown", "rstudioapi", "s2", "S7", "sass", "scales", "sf", "shadowtext", "sjlabelled", "sp", "spam", "spData", "spdep", "storr", "stringi", "stringr", "SUMMER", "survey", "survival", "sys", "systemfonts", "terra", "tibble", "tidyr", "tidyselect", "tinytex", "tzdb", "units", "UpSetR", "utf8", "vctrs", "viridis", "viridisLite", "visdat", "vroom", "withr", "wk", "xfun", "xml2", "yaml" ], "_vignettes": [ { "source": "vignette-data-preparation.html.asis", "filename": "vignette-data-preparation.html", "title": "Create customized indicators", "engine": "R.rsp::asis", "headings": [], "created": "2024-03-05 05:46:49", "modified": "2024-03-20 05:22:41", "commits": 2 }, { "source": "vignette-main.html.asis", "filename": "vignette-main.html", "title": "Prevalence mapping using DHS data", "engine": "R.rsp::asis", "headings": [], "created": "2024-03-20 05:23:30", "modified": "2024-03-20 05:23:30", "commits": 1 } ], "_score": 6.971275848738106, "_indexed": true, "_nocasepkg": "surveyprev", "_universes": [ "richardli" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2.0.0", "date": "2026-06-04T11:08:21.000Z", "distro": "noble", "commit": "751c689379fc0841fa684a06749ae89848a39f53", "fileid": "043d44b64aff9e76afc956037dfa9dec483a9425b36b315f076193498f4b95f0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/richardli/actions/runs/26947608167" }, { "r": 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